BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017H09LP1|AL427224
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1043 1914 0.0
>3x_Contig1043
Length = 5132
Score = 1914 bits (965), Expect = 0.0
Identities = 977/980 (99%), Gaps = 1/980 (0%)
Strand = Plus / Minus
Query: 1 atcttttcatttatagactctgcgttagtgatagtagtgatgggaagttgccactggaag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4506 atcttttcatttatagactctgcgtttgtgatagtagtgatgggaagttgccactggaag 4447
Query: 61 atgaagatgagacaacactcgagctttgcccggattgtattcttcctcaacctatttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4446 atgaagatgagacaacactcgagctttgcccggattgtattcttcctcaacctatttcat 4387
Query: 121 ctcatctcatctcatcgctaaaattgaagacttgaaaaattgtcaaaaagaaacaagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4386 ctcatctcatctcatcgctaaaattgaagacttgaaaaattgtcaaaaagaaacaagatc 4327
Query: 181 acgtgaaacgtttacgatgatgtatcacaaggctaattaatactgtcaccaccataataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4326 acgtgaaacgtttacgatgatgtatcacaaggctaattaatactgtcaccaccataataa 4267
Query: 241 aagactaatggatataaaaacgacgacagcacatattaaagcattgctgagcgcacctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4266 aagactaatggatataaaaacgacgacagcacatattaaagcattgctgagcgcacctgt 4207
Query: 301 cctctggaatcgtgagaatctctgaatagtattacaaacgtttacttccgttaaccgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4206 cctctggaatcgtgagaatctctgaatagtattacaaacgtttacttccgttaaccgttg 4147
Query: 361 atctacgtagttttatgaaaagaattagaaaaaaacaattgtgcgtccgttggggaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4146 atctacgtagttttatgaaaagaattagaaaaaaacaattgtgcgtccgttggggaataa 4087
Query: 421 tgttatcatatacatacacgattatcactctgacaaaaataacagattagtatatgaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4086 tgttatcatatacatacacgattatcactctgacaaaaataacagattagtatatgaaga 4027
Query: 481 cggatgcaaaacctacttccttgtccacttctttgttagaacttcgtagtcctttcttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4026 cggatgcaaaacctacttccttgtccacttctttgttagaacttcgtagtcctttcttgt 3967
Query: 541 tttgtgttttttttgttttgcatttttcatagcaatttatgtagtctttggtgagaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3966 tttgtgttttttttgttttgcatttttcatagcaatttatgtagtctttggtgagaaact 3907
Query: 601 ttgccagtgttaacttgaggtttaatatgccaaaactttttgtttataatattcaatgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3906 ttgccagtgttaacttgaggtttaatatgccaaaactttttgtttataatattcaatgaa 3847
Query: 661 atagtgttacaatttaaggcttaggaatttttcaccttacctatttggaaaattgcatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3846 atagtgttacaatttaaggcttaggaatttttcaccttacctatttggaaaattgcatca 3787
Query: 721 acatctcaaattcttgatccgaaaataagagcgataatttatccgtctcaggttccactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3786 acatctcaaattcttgatccgaaaataagagcgataatttatccgtctcaggttccactt 3727
Query: 781 ctatagggaatctaggggtgctacttggattggatgaagatcctgaagcaatgtccgagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3726 ctatagggaatctaggggtgctacttggattggatgaagatcctgaagcaatgtccgagg 3667
Query: 841 tcgtcgtagcatgttgaagtactggtgtggttttactgttcgtaagtnatccgttgtttt 900
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3666 tcgtcgtagcatgttgaagtactggtgtggttttactgttcgtaagtaatccgttgtttt 3607
Query: 901 cgctatttccaatattagagccaaaaatcccatctgagccagtgcccactataatcgagg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3606 cgctatttccaatattagagccaaaaatcccatctgagccagtgcccactataatcgagg 3547
Query: 961 -actgctatctggaatgagt 979
|||||||||||||||||||
Sbjct: 3546 aactgctatctggaatgagt 3527
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9882
Number of Sequences: 1807
Number of extensions: 9882
Number of successful extensions: 517
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)